You can download pathway information provided by iPAVS below. The files allowed to download are compressed and split into sevaral parts (if >20MB). You will need freely available 7zip (http://www.7-zip.org) to join and unzip the files. License A commercial use of data /software/code provided by iPAVS for non-academic use is not permitted unless exclusive licenses for commercial use are obtained by systems biology laboratory. Please contact support [at] cidms.org for licenses information. Terms and conditions for usage of data, program / software and code:
You can download Learning Resources ( Demo, Video, Tutorial, Documents ) here |
News and Notes > OldPosts >
Download
Selection | File type icon | File name | Description | Size | Revision | Time | User |
---|
Selection | File type icon | File name | Description | Size | Revision | Time | User |
---|---|---|---|---|---|---|---|
ċ
|
Download |
Contains Biopax from all the databases that are included in IPAVS + IPAVS curated pathways includes the latest pathway release on 08OCT2011 | 5662k | v. 4 | Oct 13, 2011, 7:30 PM | Pradeep Kumar Sreenivasaiah | |
ċ
|
Download |
IPAVS curated pathways in CellDesigner files converted to BioPAX | 625k | v. 5 | Aug 26, 2011, 2:43 AM | Pradeep Kumar Sreenivasaiah | |
ċ
|
Download |
KGML files converted to BioPAX using IPAVS-KGML Converter | 3067k | v. 4 | Aug 26, 2011, 2:43 AM | Pradeep Kumar Sreenivasaiah | |
ċ
|
Download |
BioPAX files for Panther pathways. | 1250k | v. 4 | Aug 26, 2011, 2:43 AM | Pradeep Kumar Sreenivasaiah | |
ċ
|
Download |
RB Pathway and Modules obtained from Bioinfo.curie.fr as CellDesigner Files and converted into BioPax. If you want to import it to Cytoscape. Please install BiNOM (http://bioinfo-out.curie.fr/projects/binom/) plugin and use import BioPAX document file feature. | 172k | v. 4 | Aug 26, 2011, 2:40 AM | Pradeep Kumar Sreenivasaiah | |
ċ
|
View Download |
#IPAVS BioPAX release Readme | 2k | v. 4 | Aug 26, 2011, 6:22 AM | Pradeep Kumar Sreenivasaiah | |
ċ
|
Download |
BioPAX files for SBI published pathways. | 287k | v. 4 | Aug 26, 2011, 2:43 AM | Pradeep Kumar Sreenivasaiah |
Selection | File type icon | File name | Description | Size | Revision | Time | User |
---|---|---|---|---|---|---|---|
ċ
|
Download |
JPG's of 08OCT2011 released pathways | 1713k | v. 3 | Oct 13, 2011, 7:27 PM | Pradeep Kumar Sreenivasaiah | |
ċ
|
Download |
Pathway diagram that are hosted on iPAVS are available frow download in JPG format. | 19456k | v. 4 | Jul 2, 2011, 12:59 AM | Pradeep Kumar Sreenivasaiah | |
ċ
|
Download |
Pathway diagram that are hosted on iPAVS are available frow download in JPG format. The files are compressed and split into 3parts. You will need freely available 7zip (www.7-zip.org) to join and unzip the files. | 19456k | v. 3 | Jul 2, 2011, 12:47 AM | Pradeep Kumar Sreenivasaiah | |
ċ
|
Download |
Pathway diagram that are hosted on iPAVS are available frow download in JPG format. The files are compressed and split into 3parts. You will need freely available 7zip (www.7-zip.org) to join and unzip the files. | 4777k | v. 3 | Jul 2, 2011, 12:47 AM | Pradeep Kumar Sreenivasaiah |
Selection | File type icon | File name | Description | Size | Revision | Time | User |
---|---|---|---|---|---|---|---|
ċ
|
Download |
Curated list of pathway components mapped to controlled identifiers for protein, gene, RNA and small molecules | 1286k | v. 3 | Aug 22, 2011, 5:41 PM | Pradeep Kumar Sreenivasaiah |
Selection | File type icon | File name | Description | Size | Revision | Time | User |
---|---|---|---|---|---|---|---|
ċ
|
Download |
SBML and CD files for 08OCT2011 released pathways | 23k | v. 3 | Oct 13, 2011, 7:19 PM | Pradeep Kumar Sreenivasaiah | |
ċ
|
Download |
47k | v. 3 | Aug 22, 2011, 5:40 PM | Pradeep Kumar Sreenivasaiah | ||
ċ
|
Download |
CellDesigner.xml files of KEGG pathways converted using iPAVS KGML2CD converter | 2394k | v. 3 | Aug 22, 2011, 5:40 PM | Pradeep Kumar Sreenivasaiah | |
ċ
|
Download |
SBML files of KEGG pathways converted using iPAVS KGML2SBML converter | 2394k | v. 3 | Aug 22, 2011, 5:40 PM | Pradeep Kumar Sreenivasaiah | |
ċ
|
Download |
80k | v. 3 | Aug 22, 2011, 5:40 PM | Pradeep Kumar Sreenivasaiah | ||
ċ
|
Download |
7k | v. 3 | Aug 22, 2011, 5:40 PM | Pradeep Kumar Sreenivasaiah | ||
ċ
|
Download |
44k | v. 3 | Aug 22, 2011, 5:40 PM | Pradeep Kumar Sreenivasaiah |
Selection | File type icon | File name | Description | Size | Revision | Time | User |
---|---|---|---|---|---|---|---|
ċ
|
Download |
SIF files with protein/gene name/symbol | 772k | v. 3 | Oct 13, 2011, 7:24 PM | Pradeep Kumar Sreenivasaiah | |
ċ
|
Download |
SIF file using unificationxrefs uniprot for protein entrez or ensembl for gene pubchem or chebi or kegg compound for small molecule refseq for rna | 718k | v. 4 | Oct 13, 2011, 7:23 PM | Pradeep Kumar Sreenivasaiah |
Selection | File type icon | File name | Description | Size | Revision | Time | User |
---|---|---|---|---|---|---|---|
ċ
|
Download |
XGMML files | 3041k | v. 3 | Oct 13, 2011, 7:29 PM | Pradeep Kumar Sreenivasaiah |